Molecular docking analysis of organic acids (oa) from honey as modulators of human ferritin, transferrin, and hepcidin

Srinivasan Kumaraswamy, Geetha Arumugam, Ashok Kumar Pandurangan, Vasantha Srinivasan Prabhakaran, Radhakrishnan Narayanaswamy

Molecular docking analysis of organic acids (oa) from honey as modulators of human ferritin, transferrin, and hepcidin

Číslo: 5/2022/2023
Periodikum: Journal of Microbiology, Biotechnology and Food Sciences
DOI: 10.55251/jmbfs.5743

Klíčová slova: Molecular docking, honey, organic acids, Ferritin, Transferrin, Hepicidin, kynurenic acid

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Anotace: Organic acids (OA) have been known to regulate both the availability and absorption of non-heme iron. Honey contains 0.57 % of organic acids (OA). These prompt us to carry out the present study, where fifty-three selected (honey) ligands were assessed on the docking behavior of human Ferritin, Transferrin, and Hepcidin using the PatchDock method. Furthermore, Molecular physicochemical and Absorption, Distribution, Metabolism, and Excretion (ADME) analyses were also carried out using Molinspiration and Swiss ADME online servers, respectively. Molecular Physico-chemical analysis has shown that all the ligands (except folic acid, gluconic acid, and lactobionic acid) have obeyed Lipinski's Rule of five. With regard to ADME analysis, two ligands (D-galacturonic acid and quinic acid) have been predicted to possess P-glycoprotein (P-gp) inhibition effect. In addition, the docking studies revealed that kynurenic acid showed the highest atomic contact energy for all the target proteins human Ferritin (-133.39 kcal/mol), Transferrin (-102.84 kcal/mol), and Hepcidin (-197.64 kcal/mol), respectively. Thus the present findings provide a new insight in understanding fifty-three selected (honey) ligands as modulators of human Ferritin, Transferrin, and Hepcidin.